pypet
What is pypet all about?
Install
What to do with pypet?
Quick (and not so Dirty) Example
Main Features
Cookbook
More on Trajectories and Single Runs (and Annotations)
More on Parameters and Results
More about the Environment
How to Structure your Simulations
Examples
01 First Steps
02 Natural Naming, Storage and Loading
03 Merging of Trajectories
04 Multiprocessing
05 Custom Parameter (Strange Attractor Inside!)
06 Parameter Presetting
07 Short Brian Example
08 Using the f_find_idx Function
09 Storing and Loading Large Results (or just parts of it)
Library Reference
Parameters and Results
The Trajectory, Single Runs and Group Nodes
Environment
Annotations
Utils
Exceptions
Global Constants
Storage Services
Brian Parameters and Monitors
pypet
Docs
»
Edit on GitHub
Index
A
|
B
|
C
|
D
|
E
|
F
|
H
|
L
|
N
|
O
|
P
|
Q
|
R
|
S
|
T
|
V
A
Annotations (class in pypet.annotations)
ArrayParameter (class in pypet.parameter)
B
BaseParameter (class in pypet.parameter)
BaseResult (class in pypet.parameter)
BrianMonitorResult (class in pypet.brian.parameter)
BrianParameter (class in pypet.brian.parameter)
C
cartesian_product() (in module pypet.utils.explore)
ConfigGroup (class in pypet.naturalnaming)
D
DefaultReplacementError
DerivedParameterGroup (class in pypet.naturalnaming)
E
Environment (class in pypet.environment)
F
f_add_config() (pypet.naturalnaming.ConfigGroup method)
f_add_config_group() (pypet.naturalnaming.ConfigGroup method)
f_add_derived_parameter() (pypet.naturalnaming.DerivedParameterGroup method)
f_add_derived_parameter_group() (pypet.naturalnaming.DerivedParameterGroup method)
f_add_parameter() (pypet.naturalnaming.ParameterGroup method)
f_add_parameter_group() (pypet.naturalnaming.ParameterGroup method)
f_add_result() (pypet.naturalnaming.ResultGroup method)
f_add_result_group() (pypet.naturalnaming.ResultGroup method)
f_add_to_dynamic_imports() (pypet.trajectory.Trajectory method)
f_ann_to_str() (pypet.annotations.Annotations method)
f_ann_to_string() (pypet.naturalnaming.NNGroupNode method)
(pypet.parameter.BaseParameter method)
(pypet.parameter.BaseResult method)
(pypet.parameter.Parameter method)
(pypet.parameter.Result method)
(pypet.parameter.SparseResult method)
f_as_run() (pypet.trajectory.Trajectory method)
f_backup() (pypet.trajectory.Trajectory method)
f_children() (pypet.naturalnaming.NNGroupNode method)
f_contains() (pypet.naturalnaming.NNGroupNode method)
f_continue_run() (pypet.environment.Environment method)
f_empty() (pypet.parameter.BaseParameter method)
(pypet.parameter.BaseResult method)
(pypet.parameter.Parameter method)
(pypet.parameter.Result method)
(pypet.parameter.SparseResult method)
f_expand() (pypet.trajectory.Trajectory method)
f_explore() (pypet.trajectory.Trajectory method)
f_find_idx() (pypet.trajectory.Trajectory method)
f_get() (pypet.annotations.Annotations method)
(pypet.naturalnaming.NNGroupNode method)
(pypet.parameter.BaseParameter method)
(pypet.parameter.Parameter method)
(pypet.parameter.Result method)
(pypet.parameter.SparseResult method)
f_get_annotations() (pypet.naturalnaming.NNGroupNode method)
(pypet.parameter.BaseParameter method)
(pypet.parameter.BaseResult method)
(pypet.parameter.Parameter method)
(pypet.parameter.Result method)
(pypet.parameter.SparseResult method)
f_get_array() (pypet.parameter.BaseParameter method)
(pypet.parameter.Parameter method)
f_get_children() (pypet.naturalnaming.NNGroupNode method)
f_get_class_name() (pypet.naturalnaming.NNGroupNode method)
(pypet.parameter.BaseParameter method)
(pypet.parameter.BaseResult method)
(pypet.parameter.Parameter method)
(pypet.parameter.Result method)
(pypet.parameter.SparseResult method)
f_get_config() (pypet.trajectory.SingleRun method)
f_get_derived_parameters() (pypet.trajectory.SingleRun method)
f_get_explored_parameters() (pypet.trajectory.SingleRun method)
f_get_parameters() (pypet.trajectory.SingleRun method)
f_get_results() (pypet.trajectory.SingleRun method)
f_get_run_information() (pypet.trajectory.Trajectory method)
f_get_run_names() (pypet.trajectory.Trajectory method)
f_has_children() (pypet.naturalnaming.NNGroupNode method)
f_idx_to_run() (pypet.trajectory.Trajectory method)
f_is_array() (pypet.parameter.BaseParameter method)
(pypet.parameter.Parameter method)
f_is_completed() (pypet.trajectory.Trajectory method)
f_is_empty() (pypet.annotations.Annotations method)
(pypet.parameter.BaseParameter method)
(pypet.parameter.BaseResult method)
(pypet.parameter.Parameter method)
(pypet.parameter.Result method)
(pypet.parameter.SparseResult method)
(pypet.trajectory.Trajectory method)
f_is_root() (pypet.naturalnaming.NNGroupNode method)
(pypet.parameter.BaseParameter method)
(pypet.parameter.BaseResult method)
(pypet.parameter.Parameter method)
(pypet.parameter.Result method)
(pypet.parameter.SparseResult method)
f_iter_leaves() (pypet.naturalnaming.NNGroupNode method)
f_iter_nodes() (pypet.naturalnaming.NNGroupNode method)
f_load() (pypet.trajectory.Trajectory method)
f_load_child() (pypet.naturalnaming.NNGroupNode method)
f_load_item() (pypet.trajectory.Trajectory method)
f_load_items() (pypet.trajectory.Trajectory method)
f_lock() (pypet.parameter.BaseParameter method)
(pypet.parameter.Parameter method)
f_lock_derived_parameters() (pypet.trajectory.Trajectory method)
f_lock_parameters() (pypet.trajectory.Trajectory method)
f_merge() (pypet.trajectory.Trajectory method)
f_preset_config() (pypet.trajectory.Trajectory method)
f_preset_parameter() (pypet.trajectory.Trajectory method)
f_remove_child() (pypet.naturalnaming.NNGroupNode method)
f_remove_item() (pypet.trajectory.Trajectory method)
f_remove_items() (pypet.trajectory.Trajectory method)
f_restore_default() (pypet.trajectory.Trajectory method)
f_run() (pypet.environment.Environment method)
f_set() (pypet.annotations.Annotations method)
(pypet.parameter.BaseParameter method)
(pypet.parameter.Parameter method)
(pypet.parameter.Result method)
(pypet.parameter.SparseResult method)
f_set_annotations() (pypet.naturalnaming.NNGroupNode method)
(pypet.parameter.BaseParameter method)
(pypet.parameter.BaseResult method)
(pypet.parameter.Parameter method)
(pypet.parameter.Result method)
(pypet.parameter.SparseResult method)
f_set_single() (pypet.annotations.Annotations method)
(pypet.brian.parameter.BrianMonitorResult method)
(pypet.parameter.PickleResult method)
(pypet.parameter.Result method)
(pypet.parameter.SparseResult method)
f_shrink() (pypet.trajectory.Trajectory method)
f_store() (pypet.trajectory.SingleRun method)
(pypet.trajectory.Trajectory method)
f_store_child() (pypet.naturalnaming.NNGroupNode method)
f_store_item() (pypet.trajectory.SingleRun method)
f_store_items() (pypet.trajectory.SingleRun method)
f_supports() (pypet.brian.parameter.BrianParameter method)
(pypet.parameter.BaseParameter method)
(pypet.parameter.Parameter method)
(pypet.parameter.PickleParameter method)
(pypet.parameter.SparseParameter method)
f_switch_off_all_overview() (pypet.environment.Environment method)
f_switch_off_large_overview() (pypet.environment.Environment method)
f_switch_off_small_overview() (pypet.environment.Environment method)
f_to_dict() (pypet.annotations.Annotations method)
(pypet.naturalnaming.NNGroupNode method)
(pypet.parameter.Result method)
(pypet.parameter.SparseResult method)
(pypet.trajectory.SingleRun method)
f_unlock() (pypet.parameter.BaseParameter method)
(pypet.parameter.Parameter method)
f_update_skeleton() (pypet.trajectory.Trajectory method)
f_val_to_str() (pypet.parameter.BaseParameter method)
(pypet.parameter.BaseResult method)
(pypet.parameter.Parameter method)
(pypet.parameter.Result method)
(pypet.parameter.SparseResult method)
H
HDF5StorageService (class in pypet.storageservice)
L
LazyStorageService (class in pypet.storageservice)
load() (pypet.storageservice.HDF5StorageService method)
(pypet.storageservice.LazyStorageService method)
(pypet.storageservice.LockWrapper method)
LockWrapper (class in pypet.storageservice)
N
nested_equal() (in module pypet.utils.helpful_functions)
NNGroupNode (class in pypet.naturalnaming)
NoSuchServiceError
NotUniqueNodeError
O
ObjectTable (class in pypet.parameter)
P
Parameter (class in pypet.parameter)
ParameterGroup (class in pypet.naturalnaming)
ParameterLockedException
ParameterNotArrayException
parameters_equal() (in module pypet.utils.comparisons)
PickleParameter (class in pypet.parameter)
PickleResult (class in pypet.parameter)
pypet.pypetconstants (module)
pypet.pypetexceptions (module)
pypet.utils.comparisons (module)
pypet.utils.explore (module)
pypet.utils.helpful_functions (module)
Q
QueueStorageServiceSender (class in pypet.storageservice)
QueueStorageServiceWriter (class in pypet.storageservice)
R
Result (class in pypet.parameter)
ResultGroup (class in pypet.naturalnaming)
results_equal() (in module pypet.utils.comparisons)
RowNotFoundError
run() (pypet.storageservice.QueueStorageServiceWriter method)
S
send_done() (pypet.storageservice.QueueStorageServiceSender method)
SingleRun (class in pypet.trajectory)
SparseParameter (class in pypet.parameter)
SparseResult (class in pypet.parameter)
store() (pypet.storageservice.HDF5StorageService method)
(pypet.storageservice.LazyStorageService method)
(pypet.storageservice.LockWrapper method)
(pypet.storageservice.QueueStorageServiceSender method)
T
TooManyGroupsError
Trajectory (class in pypet.trajectory)
V
v_annotations (pypet.naturalnaming.NNGroupNode attribute)
(pypet.parameter.BaseParameter attribute)
(pypet.parameter.BaseResult attribute)
(pypet.parameter.Parameter attribute)
(pypet.parameter.Result attribute)
(pypet.parameter.SparseResult attribute)
v_as_run (pypet.trajectory.Trajectory attribute)
v_check_uniqueness (pypet.trajectory.SingleRun attribute)
v_comment (pypet.parameter.BaseParameter attribute)
(pypet.parameter.BaseResult attribute)
(pypet.parameter.Parameter attribute)
(pypet.parameter.Result attribute)
(pypet.parameter.SparseResult attribute)
(pypet.trajectory.Trajectory attribute)
v_creator_name (pypet.naturalnaming.NNGroupNode attribute)
(pypet.parameter.BaseParameter attribute)
(pypet.parameter.BaseResult attribute)
(pypet.parameter.Parameter attribute)
(pypet.parameter.Result attribute)
(pypet.parameter.SparseResult attribute)
v_depth (pypet.naturalnaming.NNGroupNode attribute)
(pypet.parameter.BaseParameter attribute)
(pypet.parameter.BaseResult attribute)
(pypet.parameter.Parameter attribute)
(pypet.parameter.Result attribute)
(pypet.parameter.SparseResult attribute)
v_environment_hexsha (pypet.trajectory.SingleRun attribute)
v_fast_access (pypet.trajectory.SingleRun attribute)
v_fast_accessible (pypet.parameter.BaseParameter attribute)
(pypet.parameter.BaseResult attribute)
(pypet.parameter.Parameter attribute)
(pypet.parameter.Result attribute)
(pypet.parameter.SparseResult attribute)
v_full_copy (pypet.parameter.BaseParameter attribute)
(pypet.parameter.Parameter attribute)
(pypet.trajectory.Trajectory attribute)
v_full_name (pypet.naturalnaming.NNGroupNode attribute)
(pypet.parameter.BaseParameter attribute)
(pypet.parameter.BaseResult attribute)
(pypet.parameter.Parameter attribute)
(pypet.parameter.Result attribute)
(pypet.parameter.SparseResult attribute)
v_hexsha (pypet.environment.Environment attribute)
v_idx (pypet.trajectory.SingleRun attribute)
(pypet.trajectory.Trajectory attribute)
v_leaf (pypet.naturalnaming.NNGroupNode attribute)
(pypet.parameter.BaseParameter attribute)
(pypet.parameter.BaseResult attribute)
(pypet.parameter.Parameter attribute)
(pypet.parameter.Result attribute)
(pypet.parameter.SparseResult attribute)
v_location (pypet.naturalnaming.NNGroupNode attribute)
(pypet.parameter.BaseParameter attribute)
(pypet.parameter.BaseResult attribute)
(pypet.parameter.Parameter attribute)
(pypet.parameter.Result attribute)
(pypet.parameter.SparseResult attribute)
v_locked (pypet.parameter.BaseParameter attribute)
(pypet.parameter.Parameter attribute)
v_name (pypet.environment.Environment attribute)
(pypet.naturalnaming.NNGroupNode attribute)
(pypet.parameter.BaseParameter attribute)
(pypet.parameter.BaseResult attribute)
(pypet.parameter.Parameter attribute)
(pypet.parameter.Result attribute)
(pypet.parameter.SparseResult attribute)
v_no_data_string (pypet.parameter.Result attribute)
(pypet.parameter.SparseResult attribute)
v_parameter (pypet.parameter.BaseParameter attribute)
(pypet.parameter.BaseResult attribute)
(pypet.parameter.Parameter attribute)
(pypet.parameter.Result attribute)
(pypet.parameter.SparseResult attribute)
v_search_strategy (pypet.trajectory.SingleRun attribute)
v_standard_parameter (pypet.trajectory.SingleRun attribute)
v_standard_result (pypet.trajectory.SingleRun attribute)
v_storage_mode (pypet.brian.parameter.BrianMonitorResult attribute)
(pypet.brian.parameter.BrianParameter attribute)
v_storage_service (pypet.trajectory.Trajectory attribute)
v_stored (pypet.trajectory.SingleRun attribute)
v_time (pypet.environment.Environment attribute)
(pypet.trajectory.SingleRun attribute)
v_timestamp (pypet.environment.Environment attribute)
(pypet.trajectory.SingleRun attribute)
v_trajectory (pypet.environment.Environment attribute)
v_trajectory_name (pypet.trajectory.SingleRun attribute)
v_trajectory_time (pypet.trajectory.SingleRun attribute)
v_trajectory_timestamp (pypet.trajectory.SingleRun attribute)
v_version (pypet.trajectory.Trajectory attribute)
VersionMismatchError
Read the Docs
v: 0.1b.1
Versions
latest
stable
0.1b.8
0.1b.7
0.1b.6
0.1b.5
0.1b.4
0.1b.3
0.1b.2
0.1b.1
0.1b.0
Downloads
On Read the Docs
Project Home
Builds
Free document hosting provided by
Read the Docs
.