pypet User Manual

• What is pypet all about?
  • Main Features
• Getting Started
  • Requirements
  • Install
  • What to do with pypet?
  • Basic Work Flow
  • Quick Working Example
  • Combining pypet with an Existing Project
• Tutorial
  • Conceptualization of a Numerical Experiment
  • Naming Convention
  • #1 Pre-Processing
  • The Trajectory Container
  • #2 The Run Phase
  • #3 Post-Processing
  • Final Steps in the Main Script
  • #4 Analysis
• Cookbook (Detailed Manual)
  • 1. Naming Convention
  • 2. More on Trajectories
  • 3. Interaction with Trajectories after an Experiment
  • 4. Annotations
  • 5. More on Parameters and Results
  • 6. More about the Environment
  • 7. Using BRIAN2 with pypet
• Examples
  • Basic Concepts
  • Advanced Concepts
  • BRIAN2 Examples
• Optimization Tips
  • Group your Results into Buckets/Sets
  • Huge Explorations
  • Collect Small Results
  • Many and Fast Single Runs
• FAQs and Known Issues
  • Tools and Extensions
  • Performance Issues
  • Infinite Loops
  • Crashes and Errors
  • Other Problems